Publications

@inproceedings{mohapatraunknownagentic42,
  title = {Agentic Discovery of Multi-Channel Bioacoustic Association Algorithms},
  author = {Paramjyoti Mohapatra, Irina Tolkova, Akanksha Sarkar, Atharva Sehgal, Daniel P Salisbury, Andrew L Von Duyke, Léa Bouffaut, Holger Klinck, and Jennifer J Sun},
  year = {2026},
  booktitle = {ICLR 2026 Workshop on Foundation Models for Science: Real-World Impact and Science-First Design},
}

@article{sehgal2026evaluating35,
  title = {Evaluating Agentic Optimization on Large Codebases},
  author = {Atharva Sehgal, James Hou, Akanksha Sarkar, Ishaan Mantripragada, Swarat Chaudhuri, Jennifer J Sun, and Yisong Yue},
  year = {2026},
}

@inproceedings{wang2026simple36,
  title = {Simple Agents Outperform Experts in Biomedical Imaging Workflow Optimization},
  author = {Xuefei Wang, Kai Horstmann, Ethan Lin, Jonathan Chen, Alexander Farhang, Sophia Stiles, Atharva Sehgal, Jonathan Light, David Van Valen, Yisong Yue, and Jennifer J Sun},
  year = {2026},
  booktitle = {Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition},
  pages = {13680-13690},
}

@inproceedings{yang2026live31,
  title = {Live Interactive Training for Video Segmentation},
  author = {Xinyu Yang, Haozheng Yu, Yihong Sun, Bharath Hariharan, and Jennifer J Sun},
  year = {2026},
  booktitle = {Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition},
  pages = {39827-39837},
}

@inproceedings{zhao2025pretraining22,
  title = {Pre-training Limited Memory Language Models with Internal and External Knowledge},
  author = {Linxi Zhao, Sofian Zalouk, Christian K Belardi, Justin Lovelace, Jin Peng Zhou, Ryan Thomas Noonan, Dongyoung Go, Kilian Q Weinberger, Yoav Artzi, and Jennifer J Sun},
  year = {2026},
  booktitle = {International Conference on Learning Representations (ICLR)},
  note = {Best Paper Runner-up, NeurIPS 2025 Workshop on Causal and Compositional Foundations of Language Models (CCFM)},
  url = {https://openreview.net/forum?id=cvztBvlglK},
}

@article{dai2026pretrained34,
  title = {Pre-trained Large Language Models Learn to Predict Hidden Markov Models In-context},
  author = {Yijia Dai, Zhaolin Gao, Yahya Sattar, Sarah Dean, and Jennifer Sun},
  year = {2025},
  journal = {Advances in Neural Information Processing Systems},
  volume = {38},
  pages = {28877-28923},
  url = {https://mlanthology.org/neurips/2025/dai2025neurips-pretrained/},
}

@inproceedings{lin2025beyond32,
  title = {Beyond Accuracy: Metrics that Uncover What Makes a'Good'Visual Descriptor},
  author = {Ethan Lin, Linxi Zhao, Atharva Sehgal, and Jennifer J Sun},
  year = {2025},
  booktitle = {CVPR 2025 Workshop on Visual Concepts (VisCon)},
  note = {Best Poster Award},
  url = {https://ethan-y-lin.github.io/beyond-accuracy-project-page/},
}

@inproceedings{sarkar2025how38,
  title = {How many classes do we need to see for novel class discovery?},
  author = {Akanksha Sarkar, Been Kim, and Jennifer J Sun},
  year = {2025},
  booktitle = {CVPR 2025 Workshop on Domain Generalization: Evolution, Breakthroughs, and Future Horizons},
}

@article{sun2026tracking30,
  title = {Tracking and understanding object transformations},
  author = {Yihong Sun, Xinyu Yang, Jennifer Sun, and Bharath Hariharan},
  year = {2025},
  journal = {Advances in Neural Information Processing Systems},
  volume = {38},
  pages = {81039-81065},
  url = {https://openreview.net/forum?id=fz1mm2EsQ9},
}